Agreement (Cohen Kappa) calculation of binary variable with multiple measurements over time

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I would like to determine the reliability of a new dichotomous test vs another reference test using a Cohen Kappa approach. However, in my dataset patients have been examined multiple times. I would therefore like to account for the clustering of observation in a specific patient. I've not seen this approach previously in R packages such as psych or irr. Any thoughts? Many thanks!

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