is it possible to implement GBN conjestion window in SDN based network, while we have 2 possible routes (through R1 or R2) from the clinet to the server and we want to use both of them to increase tcp performance. thanks in advance.
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In general, No you can't.
Go Back N is a layer 4 protocol and hence only devices running Layer 4 (i.e. end hosts) will be able to interact.
This is not related to what type of network you are using.