I am trying to find any document on connecting External Crystal in AVR32DA28 and the XTAL32K2 and XTAL32K1 pins only supports 32 khz external crystal and any other value of crystal can be connected on EXTCLK pin but i can not figure out the way to connect the crystal on single pin. I know it might be a simple connection but i am new in this Embedded system so it will be really appreciable if someone can help me. The value i want to connect is 16MHZ Crystal.
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Judging from the data sheet, you can't connect a crystal to that device.
You need a dedicated crystal oscillator, which will provide an output that you can connect to EXTCLK.