I have a huge dataset (9M rows * 125 cols) and I am trying to find a way to calculate the Pearson correlation for a variable vs rest. I receive memory error for this task. I tried dask as a solution as suggested in [enter link description here][1] but it did not work.
Memory error calculating Pearson correlation on huge dask.dataframe
120 Views Asked by Ali Alami At
0
There are 0 best solutions below
Related Questions in PYTHON
- How to store a date/time in sqlite (or something similar to a date)
- Instagrapi recently showing HTTPError and UnknownError
- How to Retrieve Data from an MySQL Database and Display it in a GUI?
- How to create a regular expression to partition a string that terminates in either ": 45" or ",", without the ": "
- Python Geopandas unable to convert latitude longitude to points
- Influence of Unused FFN on Model Accuracy in PyTorch
- Seeking Python Libraries for Removing Extraneous Characters and Spaces in Text
- Writes to child subprocess.Popen.stdin don't work from within process group?
- Conda has two different python binarys (python and python3) with the same version for a single environment. Why?
- Problem with add new attribute in table with BOTO3 on python
- Can't install packages in python conda environment
- Setting diagonal of a matrix to zero
- List of numbers converted to list of strings to iterate over it. But receiving TypeError messages
- Basic Python Question: Shortening If Statements
- Python and regex, can't understand why some words are left out of the match
Related Questions in DASK
- Load hdf files in parallel from dask dataframe
- Can't use dask to open tiff read with tifffile
- How do I train a DaskLGBMClassifier using dask-cudf dataframe
- Is there a way to analyze the dask worker killed?
- dask dataframe aggregation without groupby (ddf.agg(['min','max'])?
- Dask dealing with gzipped files during processing
- How to save dataframe partitions one by one to same local database?
- Pandas categorical columns to factorize tables
- Best recommendation to read parquet files from S3 Bucket and then export into json files
- How to add an unique id of each value in a new column of dask dataframe
- dask cudf has no access to map_partitions
- How to convert convert a datetime string to timestamp in dask cudf and then sort the dataframe by this column
- how to replace dot with comma in a column in dask cudf?
- Redshift does not display the correct timestamp when using a timestamp column and parquet files
- Read data from a specific column value in a dask dataframe
Related Questions in DASK-DATAFRAME
- Load hdf files in parallel from dask dataframe
- How do I train a DaskLGBMClassifier using dask-cudf dataframe
- in Dask method from_delayed returns a scalar instead of dataframe
- Is there a way to analyze the dask worker killed?
- dask dataframe aggregation without groupby (ddf.agg(['min','max'])?
- dask cudf has no access to map_partitions
- how to replace dot with comma in a column in dask cudf?
- set_index to date with dask dataframe to circumvent memory error
- How do I specify the 'meta' argument for .apply() on a Dask dataframe?
- read file csv and do the aggregation with multiple workers , dask.distributed , dask.dataframe
- Getting pandas error while getting dataframe using dask
- How do I directly read files from HDFS using dask?
- Dask Dataframe using memory from a single GPU instead of all available in the cluster
- Can't dd.read_sql on jupyter, kernel crashes
- reading multiple csv.gz file into dask dataframe
Related Questions in PEARSON
- Dealing with Pearson Similarity returning 0 for users with equal item counts - Mahout
- R Function for Relative Frequency to all columns
- How to find a Pearson correlation starting from two column Pandas DataFrame?
- Do a correlation test between two datasets of different sizes (one has 24, the other one 25 values) in R
- How to use for loop to perform Pearson correlation in r
- Is Pearson correlation faster than Spearman correlation in R?
- Calculating Correlation between genes of different treatments
- R k-means cluster with pearson (ClusterR)
- replacement length error which doing correlation in R using cor function
- Cross-lagged Pearson correlation in R
- How to slice and calculate the pearson correlation coefficient between one big and small array with "overlapping" windows arrays
- Memory error calculating Pearson correlation on huge dask.dataframe
- performance of calculating pearson coefficient of one vector with n vectors
- pearson correlation for genes in gene expression data
- Problem with creating Pearson correlation coefficient in python
Trending Questions
- UIImageView Frame Doesn't Reflect Constraints
- Is it possible to use adb commands to click on a view by finding its ID?
- How to create a new web character symbol recognizable by html/javascript?
- Why isn't my CSS3 animation smooth in Google Chrome (but very smooth on other browsers)?
- Heap Gives Page Fault
- Connect ffmpeg to Visual Studio 2008
- Both Object- and ValueAnimator jumps when Duration is set above API LvL 24
- How to avoid default initialization of objects in std::vector?
- second argument of the command line arguments in a format other than char** argv or char* argv[]
- How to improve efficiency of algorithm which generates next lexicographic permutation?
- Navigating to the another actvity app getting crash in android
- How to read the particular message format in android and store in sqlite database?
- Resetting inventory status after order is cancelled
- Efficiently compute powers of X in SSE/AVX
- Insert into an external database using ajax and php : POST 500 (Internal Server Error)
Popular Questions
- How do I undo the most recent local commits in Git?
- How can I remove a specific item from an array in JavaScript?
- How do I delete a Git branch locally and remotely?
- Find all files containing a specific text (string) on Linux?
- How do I revert a Git repository to a previous commit?
- How do I create an HTML button that acts like a link?
- How do I check out a remote Git branch?
- How do I force "git pull" to overwrite local files?
- How do I list all files of a directory?
- How to check whether a string contains a substring in JavaScript?
- How do I redirect to another webpage?
- How can I iterate over rows in a Pandas DataFrame?
- How do I convert a String to an int in Java?
- Does Python have a string 'contains' substring method?
- How do I check if a string contains a specific word?