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20
Devhide
2024-03-27T16:15:29.660000
16
Views
names of data do not match with tip labels Error in R phylolm with Missing Data
Published on
27 March 2024 at 16:15
#r
#regression
#ape-phylo
16
Views
R 'phytools' dotTree function does not seem to accept my dataset/tree?
Published on
13 March 2024 at 06:12
#r
#phylogeny
#ape-phylo
63
Views
Painting phylogenetic trees with phytools by edge.length
Published on
08 March 2024 at 10:33
#r
#phylogeny
#ape-phylo
38
Views
Save phylo tree made by phylobase and plot it together with additional data
Published on
16 January 2024 at 02:42
#ape
#ape-phylo
39
Views
Drawing a phylogenetic tree
Published on
20 December 2023 at 19:06
#r
#phylogeny
#ape-phylo
102
Views
Phangorn's nnls.tree fails with some trees in R
Published on
15 November 2023 at 13:13
#r
#tree
#phylogeny
#ape-phylo
55
Views
Using the pic function from Ape with ggplot for Independent Contrast analysis
Published on
30 September 2023 at 19:07
#r
#ggplot2
#phylogeny
#ape
#ape-phylo
65
Views
Is there a way to label the species names in a column, which are not row names, as the relevant species names when conducting PGLS in ape?
Published on
14 July 2023 at 00:36
#r
#phylogeny
#ape-phylo
115
Views
Canonical Correspondence analysis
Published on
07 July 2023 at 00:50
#ggplot2
#vegan
#phyloseq
#ape-phylo
#multivariate-partition
61
Views
Errors with tree construct by [ape]
Published on
19 June 2023 at 11:20
#r
#phylogeny
#phyloseq
#ape
#ape-phylo
142
Views
How to create a circos plot
Published on
08 June 2023 at 10:11
#bioinformatics
#phylogeny
#ggtree
#circos
#ape-phylo
48
Views
R fatal errors with ape & bayestraits, treefile issues?
Published on
19 April 2023 at 20:27
#r
#error-handling
#ape-phylo
29
Views
Using Phaghorn or other R package to calculate tree likelihoods
Published on
14 April 2023 at 13:02
#r
#matrix
#linear-algebra
#phylogeny
#ape-phylo
167
Views
How do I fix my tree after dropping tip on a phylogenetic tree :0 character label?
Published on
17 November 2022 at 21:30
#r
#phylogeny
#ggtree
#ape-phylo
101
Views
How to remove weird lines in my haplotype network using {pegas/ape}?
Published on
03 November 2022 at 11:39
#r
#plot
#dna-sequence
#genetics
#ape-phylo
136
Views
phylotools::sub.taxa.label() error when substituting tree tip label
Published on
18 October 2022 at 13:48
#r
#tree
#phylogeny
#ape-phylo
68
Views
Selecting random phylogenetic trees from data set, runing analysis and trying to save results
Published on
28 September 2022 at 21:20
#r
#loops
#for-loop
#phylogeny
#ape-phylo
320
Views
How to rotate nodes of a time-calibrated phylogenetic tree to match a particular order in R?
Published on
28 August 2022 at 21:36
#r
#phylogeny
#ape-phylo
151
Views
Phylo correlogram in R bootstrapping error?
Published on
11 January 2022 at 18:34
#r
#phylogeny
#ape-phylo
202
Views
Ancestral state reconstruction, polytomies and the absence of branch lengths
Published on
15 September 2021 at 06:07
#r
#bioinformatics
#phylogeny
#ape-phylo
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