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20
Devhide
2023-12-14T12:13:02.413000
110
Views
extracting instruments for mendelian randomization analysis
Published on
14 December 2023 at 12:13
#r
#statistics
#bioinformatics
#gwas
77
Views
GWAS using GAPIT3, get one error:"gapit Error in merge.data.frame......negative length vectors are not allowed"
Published on
28 November 2023 at 08:01
#r
#bioinformatics
#genetic-algorithm
#gwas
69
Views
How do I filter empty lines (valid rs-number but no statistical data,) out of my GWAS sumstats?
Published on
16 October 2023 at 14:35
#filter
#gwas
172
Views
Extract summary statistic (beta, SE, EA, non-EA, EA frequency) from csv files (extracted from vcf) not working
Published on
03 October 2023 at 19:18
#r
#vcf-variant-call-format
#vcftools
#gwas
32
Views
Error in count.fields(input.files[1]) : 'file' must be a character string or connection with gwasurvivr package
Published on
21 July 2023 at 10:07
#r
#survival-analysis
#gwas
30
Views
GWAS array to matrix
Published on
01 July 2023 at 18:36
#r
#arrays
#matrix
#gwas
48
Views
GWAS Catalog API
Published on
08 May 2023 at 14:35
#python
#api
#gwas
257
Views
y-axis breaks with ggplot2 for a manhattan plot
Published on
31 January 2023 at 16:21
#r
#ggplot2
#gwas
#manhattan
#ggbreak
114
Views
loop a variable outside the file
Published on
15 December 2022 at 09:34
#linux
#bash
#gwas
98
Views
model not converged when fitting SAIGE null model
Published on
12 December 2022 at 10:47
#gwas
447
Views
GenABEL on R4.2.2 Windows
Published on
10 December 2022 at 23:05
#r
#archive
#r-package
#gwas
408
Views
Identify SNP from genetic position
Published on
07 December 2022 at 20:31
#r
#genetics
#gwas
107
Views
R - How to run a GWAS analysis with no position data?
Published on
18 November 2022 at 18:48
#r
#gwas
127
Views
how to create (cases, controls, and NA) in a phenotype column based on IDs in another txt file
Published on
28 July 2022 at 09:15
#r
#linux
#gwas
77
Views
How to Match and Extract Values between two files in python?
Published on
11 July 2022 at 05:36
#python
#python-3.x
#pandas
#dataframe
#gwas
161
Views
How do I load files/directories into MobaxTerm to start a Tractor (for genetics) operation?
Published on
27 June 2022 at 21:01
#genetics
#mobaxterm
#gwas
86
Views
How to generate random float numbers for each SNP using Python
Published on
13 June 2022 at 07:38
#python
#random
#generate
#gwas
310
Views
Custom manhattan plot multi x-axis
Published on
06 June 2022 at 13:36
#r
#ggplot2
#gwas
#manhattan
782
Views
Interactive Manhattan plot with string chromosome names
Published on
06 May 2022 at 21:58
#python
#plotly
#plotly-dash
#genome
#gwas
401
Views
How to replace 00 with Na excluding first row & first column using bash in comma separated file
Published on
29 April 2022 at 07:33
#bash
#unix
#awk
#sed
#gwas
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