Question

Interactive jobs via qsh not working in sge

score 12 · Answer 1 · 2024-03-01T16:12:34.023000

12

Views

Interactive jobs via qsh not working in sge

Published on 01 March 2024 at 16:12

score 30 · Answer 2 · 2023-07-16T16:03:26.347000

30

Views

Getting info on and requesting resources with qsub and slurm

Published on 16 July 2023 at 16:03

score 178 · Answer 3 · 2023-07-04T22:43:26.057000

178

Views

Pass a variable that contains a comma as a -v option to qsub

Published on 04 July 2023 at 22:43

score 273 · Answer 4 · 2023-04-17T06:22:31.457000

273

Views

Is there any way by which we can save the output and error files of a PBS script with current time as filename?

Published on 17 April 2023 at 06:22

score 194 · Answer 5 · 2023-04-14T12:36:35.077000

194

Views

SGE batch file not reading .bashrc and conda command not found

Published on 14 April 2023 at 12:36

score 234 · Answer 6 · 2023-03-11T22:25:39.723000

234

Views

Batch script not loading modules correctly

Published on 11 March 2023 at 22:25

score 269 · Answer 7 · 2023-01-24T12:46:23.600000

269

Views

Is it possible to see qsub job scripts and command line options etc. that will be issued by Snakemake in the dry run mode?

Published on 24 January 2023 at 12:46

score 28 · Answer 8 · 2022-11-15T12:23:01.803000

28

Views

How to print to a common file with qsub arrays?

Published on 15 November 2022 at 12:23

score 139 · Answer 9 · 2022-10-26T02:47:49.720000

139

Views

I try to run an executable file on a cluster which is compiled with cpp. But I meet some erros just like below

Published on 26 October 2022 at 02:47

score 72 · Answer 10 · 2022-10-04T11:23:33.613000

72

Views

Passing a qsub command thru ssh2_exec in PHP

Published on 04 October 2022 at 11:23

score 899 · Answer 11 · 2022-09-14T09:32:10.643000

899

Views

maximum memory for batch jobs with qsub

Published on 14 September 2022 at 09:32

score 75 · Answer 12 · 2022-09-02T12:44:44.323000

75

Views

Using `snakemake --cluster` without SLURM

Published on 02 September 2022 at 12:44

score 441 · Answer 13 · 2022-08-23T16:20:12.857000

441

Views

Qsub script - Unable to run job: Script length does not match declared length

Published on 23 August 2022 at 16:20

score 208 · Answer 14 · 2022-08-10T15:21:47.637000

208

Views

R script works perfectly with Rscript but fails once sent with SGE qsub - problem loading packages

Published on 10 August 2022 at 15:21

score 34 · Answer 15 · 2022-06-10T17:32:35.067000

34

Views

How to pass parameter expansions into qsub?

Published on 10 June 2022 at 17:32

score 154 · Answer 16 · 2022-05-10T13:48:15.850000

154

Views

Array indexing problems with heredoc and PBS

Published on 10 May 2022 at 13:48

score 112 · Answer 17 · 2022-04-18T23:23:23.287000

112

Views

pbs qsub - Output showing up in error file

Published on 18 April 2022 at 23:23

score 145 · Answer 18 · 2022-04-11T18:27:22.630000

145

Views

Why does this command for qsub to submit multiple pbs scripts work in the bash shell but not fish?

Published on 11 April 2022 at 18:27

score 103 · Answer 19 · 2022-01-05T22:49:10.783000

103

Views

'qrsh' fails with error message: "error: getcwd() failed"

Published on 05 January 2022 at 22:49

score 78 · Answer 20 · 2021-10-27T00:57:02.717000

78

Views

Passing JobID to Matlab Script (not Function) in Submitting Multiple Jobs

Published on 27 October 2021 at 00:57

List Question

Interactive jobs via qsh not working in sge

Getting info on and requesting resources with qsub and slurm

Pass a variable that contains a comma as a -v option to qsub

Is there any way by which we can save the output and error files of a PBS script with current time as filename?

SGE batch file not reading .bashrc and conda command not found

Batch script not loading modules correctly

Is it possible to see qsub job scripts and command line options etc. that will be issued by Snakemake in the dry run mode?

How to print to a common file with qsub arrays?

I try to run an executable file on a cluster which is compiled with cpp. But I meet some erros just like below

Passing a qsub command thru ssh2_exec in PHP

maximum memory for batch jobs with qsub

Using `snakemake --cluster` without SLURM

Qsub script - Unable to run job: Script length does not match declared length

R script works perfectly with Rscript but fails once sent with SGE qsub - problem loading packages

How to pass parameter expansions into qsub?

Array indexing problems with heredoc and PBS

pbs qsub - Output showing up in error file

Why does this command for qsub to submit multiple pbs scripts work in the bash shell but not fish?

'qrsh' fails with error message: "error: getcwd() failed"

Passing JobID to Matlab Script (not Function) in Submitting Multiple Jobs

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