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20
39
Views

The /etc directory appears empty when I try to access files using R

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#r #bash #shell #singularity-container
29
Views

Call singularity exec from a shell script in R

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#r #bash #shell #singularity-container
19
Views

IPC Server handler / File does not exist, running hadoop in singularity container

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#hadoop #singularity-container
24
Views

Singularity: Unable to push image to library: upload image blob failed: unauthorized

Published on
#containers #singularity-container
26
Views

--no-home Singularity flag doesn't work on Docker container in a cluster node

Published on
#docker #hpc #singularity-container
28
Views

How to run piped command with Python subprocess without deadlocking?

Published on
#python #subprocess #snakemake #singularity-container
100
Views

conveyor failed while building an apptainer image from defintion file

Published on
#docker #singularity-container #apptainer
45
Views

Bind and run a Python module with singularity from a remote directory

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#python #singularity-container
17
Views

Python package location docker on singularity

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#python #docker #containers #singularity-container
19
Views

Use --contain and --bind in singularity run command

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#python #docker #containers #singularity-container
50
Views

Encountered Errors in Storing Images using Singularity in Cluster

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#docker #debugging #singularity-container
109
Views

singularity exec is not recognizing executables in container $PATH (converted micromamba docker image to singularity image)

Published on
#docker #path #environment-variables #containers #singularity-container
37
Views

singularity build cannot install build-essentials

Published on
#linux #build #debian #apt #singularity-container
32
Views

I cannot execute a program in a container when working with Apptainer becaouse the path is not found

Published on
#singularity-container
47
Views

Running c++ on cluster with slurm and sif container

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#c++ #dockerfile #slurm #hpc #singularity-container
22
Views

Intermediate build checkpoints for singularity containers?

Published on
#build #singularity-container #apptainer
181
Views

Singularity container cannot find files after being created from a Docker image

Published on
#docker #conda #hpc #singularity-container #apptainer
44
Views

Failed to install SingularityCE in WSL - failed to verify certificate

Published on
#wsl-2 #singularity-container
106
Views

loop through list element one at the time

Published on
#bash #loops #variables #singularity-container
111
Views

Toil-cwl-runner not using default-container option with singularity option

Published on
#singularity-container #common-workflow-language

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