Question

Nextflow script for performing quality control and trimming the sequence

score 38 · Answer 1 · 2024-03-31T06:47:12.450000

38

Views

Nextflow script for performing quality control and trimming the sequence

Published on 31 March 2024 at 06:47

score 30 · Answer 2 · 2024-03-29T11:38:58.930000

30

Views

Why Nextflow pipeline don't find a file?

Published on 29 March 2024 at 11:38

score 23 · Answer 3 · 2024-03-28T06:31:41.097000

23

Views

Nextflow filter entire tuple based on one value

Published on 28 March 2024 at 06:31

score 53 · Answer 4 · 2024-03-26T01:14:17.497000

53

Views

Why is publishDir not copying large directories?

Published on 26 March 2024 at 01:14

score 20 · Answer 5 · 2024-03-18T15:39:54.220000

20

Views

add systems test and unit tests to nextflow code

Published on 18 March 2024 at 15:39

score 23 · Answer 6 · 2024-03-18T10:36:22.443000

23

Views

the nextflow channel join pattern

Published on 18 March 2024 at 10:36

score 51 · Answer 7 · 2024-03-13T04:17:38.300000

51

Views

Nextflow: How to limit number of total CPUs (or memory) used by local executor?

Published on 13 March 2024 at 04:17

score 28 · Answer 8 · 2024-03-10T18:55:50.847000

28

Views

Nextflow unable to create pugins dir

Published on 10 March 2024 at 18:55

score 41 · Answer 9 · 2024-03-08T03:38:20.667000

41

Views

How to create a dict from the list using nextflow to map groupkey

Published on 08 March 2024 at 03:38

score 30 · Answer 10 · 2024-03-07T10:38:31.247000

30

Views

Nextflow+Conda: [Errno 2] No such file or directory

Published on 07 March 2024 at 10:38

score 38 · Answer 11 · 2024-03-05T15:47:40.557000

38

Views

Nextflow Pipeline: Efficiently process genomic regions stored in multiple files and merge the results afterward while keeping track of files

Published on 05 March 2024 at 15:47

score 22 · Answer 12 · 2024-03-05T13:25:16.440000

22

Views

Error in running nfcore-sarek in EC2 by using aws batch

Published on 05 March 2024 at 13:25

score 18 · Answer 13 · 2024-03-05T12:49:17.967000

18

Views

Nextflow crash on AWS Batch with transition error

Published on 05 March 2024 at 12:49

score 52 · Answer 14 · 2024-02-26T02:45:03.750000

52

Views

conda activate the specific env in nextflow

Published on 26 February 2024 at 02:45

score 31 · Answer 15 · 2024-02-23T16:17:48.197000

31

Views

How to stitch workflows together from different machines NEXTFLOW

Published on 23 February 2024 at 16:17

score 31 · Answer 16 · 2024-02-23T15:02:52.143000

31

Views

Nextflow process run in gcp stays idle forever after crashing - how to increase gcsfuse max opt?

Published on 23 February 2024 at 15:02

score 29 · Answer 17 · 2024-02-19T10:54:55.730000

29

Views

Nextflow unique dir for publish dir on resume

Published on 19 February 2024 at 10:54

score 71 · Answer 18 · 2024-02-17T13:31:39.807000

71

Views

Nextflow Execution Environment Differs Between Processes

Published on 17 February 2024 at 13:31

score 52 · Answer 19 · 2024-02-07T09:18:53.783000

52

Views

Nextflow only processes one of my paired-end samples

Published on 07 February 2024 at 09:18

score 65 · Answer 20 · 2024-02-06T06:20:25.343000

65

Views

Nextflow Not a valid path value: 'status' Error

Published on 06 February 2024 at 06:20

List Question

Nextflow script for performing quality control and trimming the sequence

Why Nextflow pipeline don't find a file?

Nextflow filter entire tuple based on one value

Why is publishDir not copying large directories?

add systems test and unit tests to nextflow code

the nextflow channel join pattern

Nextflow: How to limit number of total CPUs (or memory) used by local executor?

Nextflow unable to create pugins dir

How to create a dict from the list using nextflow to map groupkey

Nextflow+Conda: [Errno 2] No such file or directory

Nextflow Pipeline: Efficiently process genomic regions stored in multiple files and merge the results afterward while keeping track of files

Error in running nfcore-sarek in EC2 by using aws batch

Nextflow crash on AWS Batch with transition error

conda activate the specific env in nextflow

How to stitch workflows together from different machines NEXTFLOW

Nextflow process run in gcp stays idle forever after crashing - how to increase gcsfuse max opt?

Nextflow unique dir for publish dir on resume

Nextflow Execution Environment Differs Between Processes

Nextflow only processes one of my paired-end samples

Nextflow Not a valid path value: 'status' Error

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