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20
18
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How do I see which versions of packages are compatible with one another

Published on
#pandas #conda #bioconductor
13
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Installation multiple of CRAN, Bioconductor and Github packages through Docker file in ubunto system

Published on
#github #dockerfile #r-package #bioconductor
31
Views

How to include R dependency in a python package

Published on
#python #r #pip #bioconductor #pyproject.toml
63
Views

How to extract all perfect matches > 10 nucleotides in a pairwise alignement made with Biostrings in R?

Published on
#r #tidyverse #bioconductor
34
Views

R package 'BiocNeighbors' resturn different nearest neighbors with other packages (e.g., FNN package)

Published on
#r #knn #nearest-neighbor #bioconductor
38
Views

Parallelise in snakemake using bioconductor, a singularity container and slurm

Published on
#r #containers #slurm #snakemake #bioconductor
28
Views

R-Packages: mdgsa installation errors

Published on
#r #r-package #bioconductor
163
Views

Trouble installing an R package: fatal error: libxml/globals.h: No such file or directory

Published on
#r #docker #ubuntu #jupyter-notebook #bioconductor
400
Views

Can't install older versions of Matrix package

Published on
#r #bioconductor #seurat #rna-seq
32
Views

Error when attempting to use "function()" to repeat code for different GAlignment objects

Published on
#r #dataframe #bioconductor
23
Views

IRanges output length not equal to input

Published on
#bioconductor #genomicranges
47
Views

Differentiate among packages installed through CRAN and Bioconductor [R]

Published on
#r #environment #cran #bioconductor #reproducible-research
59
Views

Run meta-analysis with MetaIntegrator on specific genes or probes

Published on
#r #bioinformatics #bioconductor #meta-analysis
194
Views

How to maximize R fuzzyjoin/stringdist speed and memory efficiency

Published on
#r #data.table #bioconductor #stringdist #fuzzyjoin
27
Views

Geeting a ld: warning: directory not found for option when trying to download R package from source

Published on
#r #gcc #bioconductor
44
Views

Building a docker image for an old version of R to utilize an older package

Published on
#r #docker #ubuntu #dockerfile #bioconductor
87
Views

How would I convert .xml files into .fasta format

Published on
#r #bioconductor #rentrez
45
Views

How to subset String object in R

Published on
#r #string #substring #bioconductor
86
Views

Customized BED file cannot be read by Methylkit readTranscriptFeatures function

Published on
#r #bioinformatics #bioconductor #bed
65
Views

how to solve "the return value is not 0" when downloading R package "HPO.db"

Published on
#r #download #package #bioconductor

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