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20
65
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Error in is.na(output) || !is.character(output) : 'length = 3' in coercion to 'logical(1)'

Published on
#r #error-handling #rentrez
55
Views

Rentrez pubmed search - order by descending publication date

Published on
#r #pubmed #rentrez
87
Views

How would I convert .xml files into .fasta format

Published on
#r #bioconductor #rentrez
167
Views

How do I BLAST in R, Extract species names from NCBI taxonomy data using rentrez in R?

Published on
#r #taxonomy #blast #rentrez
35
Views

Why does my pattern extractor code return false positives?

Published on
#python #web-scraping #biopython #ncbi #rentrez
124
Views

Why does my for loop in Python never stop running?

Published on
#python #biopython #blast #ncbi #rentrez
83
Views

NCBI Rentrez timeout HTTP failure 400

Published on
#r #httr #ncbi #rentrez
160
Views

How do I download a large number of GenBank sequences using entrez_fetch in R?

Published on
#r #bioinformatics #dna-sequence #ncbi #rentrez
136
Views

Rentrez is pulling the wrong data from NCBI in R?

Published on
#r #bioinformatics #dna-sequence #rentrez
199
Views

Downloading DNA sequence data in R using entrez_fetch: cannot retrieve query

Published on
#r #bioinformatics #rentrez
254
Views

Extracting author and affiliation from xml file retrieved using rentrez

Published on
#r #database #pubmed #rentrez #pubmed-api
320
Views

using pubmedR to search by doi

Published on
#r #rentrez
309
Views

NotXMLError: Failed to parse the XML data

Published on
#python #biopython #pubmed #rentrez #pubmed-api
125
Views

How do I provide my Identity / Email when connecting to NCBI through Rentrez?

Published on
#r #bioinformatics #ncbi #rentrez
552
Views

Using R to fetch a Pubmed abstract by using its title

Published on
#r #pubmed #rentrez
1.1k
Views

Obtaining data from NCBI gene database with R

Published on
#html #r #rselenium #ncbi #rentrez
525
Views

How to retrieve data using the rentrez package by giving a list of query names instead of a single one?

Published on
#r #rentrez
120
Views

rentrez entrez_summary premature EOF

Published on
#r #pubmed #rentrez
263
Views

Problems extracting metadata from NCBI in R

Published on
#r #csv #metadata #ncbi #rentrez
1k
Views

Is it possible to get the number of times an article has been cited?

Published on
#python-3.x #web-crawler #citations #pubmed #rentrez

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