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20
Devhide
2024-03-25T08:15:40.723000
26
Views
Clustering Medium length (100bp) DNA Sequences
Published on
25 March 2024 at 08:15
#machine-learning
#cluster-analysis
#bioinformatics
#biopython
#dna-sequence
35
Views
Residue contact map
Published on
23 March 2024 at 11:21
#bioinformatics
#biopython
#protein-database
110
Views
Extracting NCBI RefSeq and Submitted GenBank assembly accession numbers using Selenium and BeautifulSoup
Published on
18 March 2024 at 18:21
#python
#selenium-webdriver
#beautifulsoup
#biopython
49
Views
How to iterate a list created with SeqIO using re.findall, FASTA-input
Published on
18 March 2024 at 15:09
#python
#regex
#biopython
#fasta
#python-3.12
56
Views
Difficulty Extracting GenBank Accession Number Using Species and Strain Name, using webscraping (Using BeautifulSoup or Selenium)
Published on
18 March 2024 at 07:45
#python
#selenium-webdriver
#beautifulsoup
#biopython
19
Views
lncRNA and ncPEPs identification
Published on
13 March 2024 at 11:58
#bioinformatics
#biopython
#protein-database
52
Views
Biopython and accessing fasta file stored in the computer
Published on
11 March 2024 at 18:39
#python
#biopython
#fasta
87
Views
Modifying values in .pdb file and save as new
Published on
11 March 2024 at 15:53
#python
#bioinformatics
#biopython
69
Views
I am receiving a byte-type ahead of every line in xml , which i have trimmed , but then the xml is unreadable by any parser. How to parse pmc xml?
Published on
01 March 2024 at 12:09
#python
#xml
#elementtree
#biopython
#pubmed
34
Views
Biopython PhyloTree to PyVis Network
Published on
27 February 2024 at 19:01
#python
#biopython
#phylogeny
89
Views
no module found even after installation of any module for python
Published on
27 February 2024 at 09:11
#python
#visual-studio-code
#biopython
24
Views
Unable to import Biopython in Wing IDE
Published on
25 February 2024 at 20:41
#python-3.x
#homebrew
#biopython
#wing-ide
64
Views
BioPython Clades to Networkx labelled nodes
Published on
12 February 2024 at 02:31
#data-structures
#networkx
#biopython
59
Views
BioPython phylo: collapsing nodes on tree if node in list and rename the respective collapsed node
Published on
10 February 2024 at 13:39
#biopython
#phylogeny
77
Views
Clustering for the Protein sequences (With/without MSA)
Published on
08 February 2024 at 08:00
#python
#python-3.x
#biopython
#hierarchical-clustering
61
Views
How to code for a python program (without using biopython) to read & list out all open reading frames (ORFs) of each sequence from a multi-fasta file
Published on
05 February 2024 at 19:55
#python-3.x
#bioinformatics
#biopython
133
Views
Replacing PDB atom names with Biopython
Published on
14 December 2023 at 13:10
#bioinformatics
#biopython
112
Views
Biopython bioSQL Unable to remove database using server.remove_database('dbname')
Published on
01 December 2023 at 05:57
#python
#mysql
#biopython
#ncbi
34
Views
structures corresponding to metastable states in python
Published on
07 November 2023 at 22:18
#python
#data-analysis
#biopython
#hidden-markov-models
#mdanalysis
113
Views
Searching Entrez based on paper title
Published on
02 November 2023 at 18:31
#python
#biopython
#ncbi
#pubmed
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